libSBML Perl API
libSBML 5.8.0 Perl API
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![]() ![]() | Implementation of SBML's AlgebraicRule construct |
![]() ![]() | Implementation of SBML's AssignmentRule construct |
![]() ![]() | Abstract Syntax Tree (AST) representation of a mathematical expression |
![]() ![]() | Implementation of SBML's Compartment construct |
![]() ![]() | Implementation of SBML's Level 2's CompartmentType construct |
![]() ![]() | comp A convenience subclass of 'comp' package SBase-derived classes |
![]() ![]() | comp The core module of the 'comp' package extension |
![]() ![]() | comp Flattening converter for the 'comp' package |
![]() ![]() | comp Implementation of the 'comp' package extention to the Model construct |
![]() ![]() | comp Implementation of the 'comp' package extention to the SBase construct |
![]() ![]() | comp Implementation of the 'comp' package extention to the SBMLDocument construct |
![]() ![]() | comp Representaton of errors, warnings and other diagnostics for the 'comp' package |
![]() ![]() | comp Entry point for libSBML's implementation of SBML validation rules for the 'comp' package |
![]() ![]() | comp Support class for performing operations on SBML objects |
![]() ![]() | Implementation of SBML's Constraint construct |
![]() ![]() | Class of object that encapsulates a conversion option |
![]() ![]() | Class of object that encapsulates the properties of an SBML converter |
![]() ![]() | Representation of MIRIAM-compliant controlled vocabulary annotation |
![]() ![]() | Representation of MIRIAM-compliant dates used in ModelHistory |
![]() ![]() | Implementation of SBML's Delay construct for Event |
![]() ![]() | comp Implementation of the Deletion construct from the 'comp' package |
![]() ![]() | Implementation of SBML's Event construct |
![]() ![]() | Implementation of SBML's EventAssignment construct for Event |
![]() ![]() | comp Implementation of the ExternalModelDefinition construct from the 'comp' package |
![]() ![]() | Structure used to track the state of tokenizing a string |
![]() ![]() | Implementation of SBML's FunctionDefinition construct |
![]() ![]() | Implementation of SBML's InitialAssignment construct |
![]() ![]() | Implementation of SBML's KineticLaw construct |
![]() ![]() | A helper class for controlling the behavior of the text-string formula parser |
![]() ![]() | Simple, plain, generic lists, and associated list utilities |
![]() ![]() | Parent class for the various SBML "ListOfXYZ" classes |
![]() ![]() | Implementation of SBML Level 2's ListOfCompartments construct |
![]() ![]() | Implementation of SBML's ListOfCompartmentTypes construct |
![]() ![]() | Implementation of SBML's ListOfConstraints construct |
![]() ![]() | comp Implementation of the ListOfDeletions construct from the 'comp' package |
![]() ![]() | Implementation of SBML's ListOfEventAssignments construct |
![]() ![]() | Implementation of SBML's ListOfEvents construct |
![]() ![]() | comp Implementation of the ListOfExternalModelDefinitions construct from the 'comp' package |
![]() ![]() | Implementation of SBML's ListOfFunctionDefinitions construct |
![]() ![]() | Implementation of SBML's ListOfInitialAssignments construct |
![]() ![]() | Implementation of SBML Level 3's ListOfLocalParameters construct |
![]() ![]() | comp Implementation of the ListOfModelDefinitions construct from the 'comp' package |
![]() ![]() | Implementation of SBML's ListOfParameters construct |
![]() ![]() | comp Implementation of the ListOfPorts construct from the 'comp' package |
![]() ![]() | Implementation of SBML's ListOfReactions construct |
![]() ![]() | comp Implementation of the ListOfReplacedElements construct from the 'comp' package |
![]() ![]() | Implementation of SBML's ListOfRules construct |
![]() ![]() | Implementation of SBML Level 2's ListOfSpecies construct |
![]() ![]() | Implementation of SBML's ListOfSpeciesReferences construct |
![]() ![]() | Implementation of SBML's ListOfSpeciesTypes construct |
![]() ![]() | comp Implementation of the ListOfSubmodels construct from the 'comp' package |
![]() ![]() | Implementation of SBML's ListOfUnitDefinitions construct |
![]() ![]() | Implementation of SBML's ListOfUnits construct |
![]() ![]() | Implementation of SBML Level 3's LocalParameter construct |
![]() ![]() | Implementation of SBML's Model construct |
![]() ![]() | Representation of MIRIAM-compliant model creator data used in ModelHistory |
![]() ![]() | comp Implementation of the ModelDefinition construct from the 'comp' package |
![]() ![]() | Representation of MIRIAM-compliant model history data |
![]() ![]() | Implementation of SBML's ModifierSpeciesReference construct |
![]() ![]() | Implementation of SBML's Parameter construct |
![]() ![]() | comp Implementation of the Port construct from the 'comp' package |
![]() ![]() | Implementation of SBML Level 3's Priority construct for Event |
![]() ![]() | Implementation of SBML's RateRule construct |
![]() ![]() | Read/write/manipulate RDF annotations stored in SBML annotation elements |
![]() ![]() | Implementation of SBML's Reaction construct |
![]() ![]() | comp Implementation of the ReplacedBy construct from the 'comp' package |
![]() ![]() | comp Implementation of the ReplacedElement construct from the 'comp' package |
![]() ![]() | comp A convenience subclass of the ReplacedElement and ReplacedBy constructs from the 'comp' package |
![]() ![]() | Implementation of SBML's Rule construct |
![]() ![]() | Implementation of SBase, the base class of most SBML objects |
![]() ![]() | Representation of an extension point of SBML's package extension |
![]() ![]() | Representation of a plug-in object of SBML's package extension |
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![]() ![]() | comp Implementation of the SBaseRef construct from the 'comp' package |
![]() ![]() | Class of exceptions thrown by constructors of some libSBML objects |
![]() ![]() | Base class for SBML converters |
![]() ![]() | Registry of all SBML converters |
![]() ![]() | Container for an SBML document and interface for global operations on SBML documents |
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![]() ![]() | Representation of errors, warnings and other diagnostics |
![]() ![]() | Log of errors and other events encountered during SBML processing |
![]() ![]() | The core component of SBML's package extension |
![]() ![]() | An exception class for SBMLExtensionException |
![]() ![]() | Class to store level, version and namespace information of SBML extension package |
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![]() ![]() | comp Base class for SBML resolvers |
![]() ![]() | SBML converter for replacing function definitions |
![]() ![]() | SBML converter for replacing initial assignments |
![]() ![]() | Implementation of basic SBML consistency checks and other validations |
![]() ![]() | SBML converter for transforming documents from one Level+Version to another |
![]() ![]() | Class to store SBML level, version and namespace information |
![]() ![]() | Methods for reading SBML from files and text strings |
![]() ![]() | comp Base class for SBML resolvers |
![]() ![]() | comp Registry of all SBML resolvers |
![]() ![]() | SBML converter for reordering rules and assignments in a model |
![]() ![]() | SBML converter for removing packages |
![]() ![]() | SBML converter to convert a model's units to SI units |
![]() ![]() | comp utility class for handling uris |
![]() ![]() | Base class for SBML validators |
![]() ![]() | Support class for performing operations on SBML objects |
![]() ![]() | Methods for writing SBML to files and text strings |
![]() ![]() | Methods for interacting with Systems Biology Ontology terms |
![]() ![]() | Implementation of SBML's SimpleSpeciesReference construct |
![]() ![]() | Implementation of SBML's Species construct |
![]() ![]() | Implementation of SBML's SpeciesReference construct |
![]() ![]() | Implementation of SBML Level 2's SpeciesType construct |
![]() ![]() | Implementation of SBML Level 2's StoichiometryMath construct |
![]() ![]() | comp Implementation of the Submodel construct from the 'comp' package |
![]() ![]() | Methods for checking syntax of SBML identifiers and other strings |
![]() ![]() | Structure used to store a token returned by FormulaTokenizer_nextToken() |
![]() ![]() | Implementation of SBML's Trigger construct for Event |
![]() ![]() | Implementation of SBML's Unit construct |
![]() ![]() | Implementation of SBML's UnitDefinition construct |
![]() ![]() | Entry point for libSBML's implementation of SBML validation rules |
![]() ![]() | Helper class for implementing SBML validation and consistency-checking |
![]() ![]() | Representation of attributes on an XML node |
![]() ![]() | Class of exceptions thrown by constructors of some libSBML objects |
![]() ![]() | Representation of errors, warnings and other diagnostics |
![]() ![]() | Log of errors and other events encountered while processing an XML file or data stream |
![]() ![]() | Representation of XML Namespaces |
![]() ![]() | Representation of a node in an XML document tree |
![]() ![]() | Representation of a token in an XML stream |
![]() ![]() | Representation of a qualified XML name |